Interpretive Summary: Temporal dynamics of genetic parameters and SNP effects for performance and disorder traits in poultry undergoing genomic selection
By: Jennifer Richter, Jorge Hidalgo, Fernando Bussiman, Vivian Breen, Ignacy Misztal, Daniela Lourenco
Genetic parameters are used to predict breeding values for individuals in breeding programs undergoing selection. However, inaccurate genetic parameters can cause breeding values to be biased, and genetic parameters can change over time due to multiple factors. This study aimed to investigate how genetic parameters changed over time in a broiler population using time intervals and observing the behavior of single nucleotide polymorphism (SNP) effects. We studied four traits related to production and disorders while also studying the impact of using genomic information on the estimates. Genetic variances showed an overall decreasing trend, whereas residual variances increased during each interval, resulting in decreasing heritability estimates. Genetic correlations between traits varied but with no major changes over time. Estimates tended to be lower when genomic information was included in the analysis. SNP effects showed changes over time, indicating changes to the genetic background of this population. Using outdated variance components in a population under selection may not represent the current population. Furthermore, when genomic selection is practiced, accounting for this information while estimating variance components is important to avoid biases.
Read the full article in the Journal of Animal Science.